Search_Gene

Query Gene
Gene name: Example: BCL2L11, ERCC1

Symbol:

CAPN13

Description:

calpain 13 [Source:HGNC Symbol;Acc:16663]

Location:

Chr2:30945637-31043408[-]

CRmiRSNP:

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Records:33

Compound	CRmiRSNP	SNP_sig	Model	Molecule	Mol_sig	Type
NSC 41274	rs2280404	0.001583281	M1	CAPN13	0.036	Target_3'utr
NSC 73900	rs2280404	0.000136818	M1	CAPN13	0.039	Target_3'utr
NSC 142506	rs2280404	0.01737115	M1	CAPN13	0.043	Target_3'utr
NSC 146268	rs2280404	0.03543747	M1	CAPN13	0.032	Target_3'utr
NSC 617823	rs2280404	0.02728693	M1	CAPN13	0.022	Target_3'utr
NSC 633258	rs2280404	0.04668492	M1	CAPN13	0.005	Target_3'utr
NSC 650821	rs2280404	0.009725842	M2	CAPN13	0.044	Target_3'utr
NSC 651337	rs2280404	2.10E-05	M2	CAPN13	0.008	Target_3'utr
NSC 658288	rs2280404	1.01E-05	M2	CAPN13	0.001	Target_3'utr
NSC 662119	rs2280404	0.01333952	M1	CAPN13	0.019	Target_3'utr
NSC 671136	rs2280404	0.003041725	M2	CAPN13	0.037	Target_3'utr
NSC 671898	rs2280404	0.01398321	M1	CAPN13	0.017	Target_3'utr
NSC 673652	rs2280404	2.90E-05	M2	CAPN13	0.037	Target_3'utr
NSC 675988	rs2280404	0.003388175	M1	CAPN13	0.017	Target_3'utr
NSC 676789	rs2280404	2.29E-05	M2	CAPN13	0.027	Target_3'utr

Model : M1-Allele, M2-Recessive, M3-Additive, M4-Dominant
Total:3 Current:1 [First] [Prev] Next Last

Compound:

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Records:72

Gene	Compound	Gen_sig	Exp_pattern
CAPN13	NSC 105348	0.045	Up
CAPN13	VERNOLIDE	0.043	Up
CAPN13	NSC 142506	0.043	Up
CAPN13	as-Triazine-3,5(2H,4H)-dione, 2-.beta.-D-ribofuranosyl-3-thio-	0.032	Up
CAPN13	Benzamide, N-[2-(diethylamino)ethyl]-4-methyl-2-nitro- 3-(phenylmethoxy)-	0.012	Up
CAPN13	NSC 41274	0.036	Up
CAPN13	NSC 57958	0.002	Down
CAPN13	4-Morpholinepentanoic acid, .alpha.-(phenylmethylene)- .beta.-oxo-, ethyl ester, hydrochloride	0.022	Up
CAPN13	Benzo[1,2-c:4,5-c']dipyrrole-1,3,5,7(2H,6H)-tetraimine	0.042	Up
CAPN13	2-Propen-1-one, 3-(l,3-benzodioxol-5-yl)-1-(1,4-dioxo- 2,6,7-trimethylquinoxalin-3-yl)-	0.041	Up
CAPN13	4,8-Ethenobenzo[1,2-c:4,5-c']dipyrrole-1,3,5,7-tetrone, 2,6-bis(3-cyanophenyl)-1,2,3,3a,4,4a,5,6,7,7a,8,8a- dodecahydro-	0.005	Up
CAPN13	3,8,13,18-Pentaazapentacosane pentahydrochloride	0.011	Down
CAPN13	NSC 650821	0.044	Down
CAPN13	NSC 651337	0.008	Down
CAPN13	NSC 658288	0.001	Up

Expression pattern: Sensitivity / Resistance
Total:5 Current:1 [First] [Prev] Next Last

SNP:

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Records:10

SNP	Gene	SNP_location	SNP_allele
rs72613844	CAPN13	Chr2:30945661	T/C
rs190720767	CAPN13	Chr2:30945669	A/C
rs114398135	CAPN13	Chr2:30945681	A/C
rs115484220	CAPN13	Chr2:30945694	C/T
rs181012574	CAPN13	Chr2:30945727	G/A
rs116267569	CAPN13	Chr2:30945841	T/C
rs2280404	CAPN13	Chr2:30945896	A/G
rs72613845	CAPN13	Chr2:30945968	G/A
rs186245207	CAPN13	Chr2:30945994	G/T
rs72613846	CAPN13	Chr2:30946000	T/C

Total:1 Current:1 [First] [Prev] [Next] [Last]

miRNA:

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Records:73

Gene	Gen_transcript	miRNA	miR_location
CAPN13	ENST00000295055	hsa-mir-520e	Chr19:54179018-54179038[+]
CAPN13	ENST00000295055	hsa-mir-520f	Chr19:54185467-54185488[+]
CAPN13	ENST00000295055	hsa-mir-520g	Chr19:54225474-54225497[+]
CAPN13	ENST00000295055	hsa-mir-520h	Chr19:54245820-54245841[+]
CAPN13	ENST00000359414	hsa-mir-522-5p	Chr19:54254480-54254501[+]
CAPN13	ENST00000295055	hsa-mir-526b-5p	Chr19:54197660-54197682[+]
CAPN13	ENST00000295055	hsa-mir-543	Chr14:101498370-101498391[+]
CAPN13	ENST00000295055	hsa-mir-549	Chr15:81134334-81134354[-]
CAPN13	ENST00000295055	hsa-mir-556-5p	Chr1:162312351-162312372[+]
CAPN13	ENST00000295055	hsa-mir-558	Chr2:32757280-32757298[+]
CAPN13	ENST00000295055	hsa-mir-576-3p	Chr4:110409908-110409929[+]
CAPN13	ENST00000295055	hsa-mir-581	Chr5:53247394-53247414[-]
CAPN13	ENST00000295055	hsa-mir-588	Chr6:126805792-126805812[+]
CAPN13	ENST00000295055	hsa-mir-597	Chr8:9599197-9599218[+]
CAPN13	ENST00000295055	hsa-mir-599	Chr8:100548879-100548898[-]

Total:5 Current:4 First Prev Next Last