Search_Gene

Query Gene
Gene name: Example: BCL2L11, ERCC1

Symbol:

LIG4

Description:

ligase IV, DNA, ATP-dependent [Source:HGNC Symbol;Acc:6601]

Location:

Chr13:108859794-108870716[-]

CRmiRSNP:

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Records:null

Compound	CRmiRSNP	SNP_sig	Model	Molecule	Mol_sig	Type

Model : M1-Allele, M2-Recessive, M3-Additive, M4-Dominant
Total:0 Current:1 [First] [Prev] [Next] [Last]

Compound:

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Records:169

Gene	Compound	Gen_sig	Exp_pattern
LIG4	1H,3H-Benzo[c]pyrrolo[3,4-a]carbazole-1,3-dione, 2,3a,3b,4,5,6,7,7a-octahydro-2-(4-methoxyphenyl)- 9-methyl-5-phenyl-	0.023	Down
LIG4	NSC 689409	0.034	Down
LIG4	2-Methyl-4-N,N-bis-2'-cyanoethylaminobenzylidene rhodanine	0.035	Down
LIG4	NSC 691421	0.007	Down
LIG4	NSC 691895	0.009	Down
LIG4	NSC 693167	0.015	Down
LIG4	NSC 694221	0.041	Down
LIG4	4-[N-(4-amino-4-deoxy-N10-methylpteroyl)aminobutanoic acid	0.046	Down
LIG4	NSC 694964	0.018	Down
LIG4	NSC 695837	0.032	Down
LIG4	NSC 697042	0.001	Down
LIG4	NSC 697100	0.035	Down
LIG4	NSC 699097	0.035	Down
LIG4	NSC 699107	0.008	Down
LIG4	NSC 699108	0.014	Down

Expression pattern: Sensitivity / Resistance
Total:12 Current:7 First Prev Next Last

SNP:

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Records:56

SNP	Gene	SNP_location	SNP_allele
rs113388531	LIG4	Chr13:108859800	G/A
rs113388531	LIG4	ChrLRG_79:108859800	G/A
rs10131	LIG4	Chr13:108859846	C/T
rs10131	LIG4	ChrLRG_79:108859846	C/T
rs75642465	LIG4	Chr13:108859898	C/T
rs75642465	LIG4	ChrLRG_79:108859898	C/T
rs146506306	LIG4	Chr13:108860025	-/AAAA
rs146506306	LIG4	ChrLRG_79:108860025	-/AAAA
rs116018061	LIG4	Chr13:108860055	T/A
rs116018061	LIG4	ChrLRG_79:108860055	T/A
rs201529988	LIG4	Chr13:108860145	G/C
rs201529988	LIG4	ChrLRG_79:108860145	G/C
rs79925936	LIG4	Chr13:108860180	G/A
rs79925936	LIG4	ChrLRG_79:108860180	G/A
rs78960349	LIG4	Chr13:108860181	C/A

Total:4 Current:1 [First] [Prev] Next Last

miRNA:

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Records:33

Gene	Gen_transcript	miRNA	miR_location
LIG4	ENST00000310534	hsa-mir-144-5p	Chr17:27188601-27188622[-]
LIG4	ENST00000310534	hsa-mir-155-5p	Chr21:26946295-26946317[+]
LIG4	ENST00000310534	hsa-mir-181a-3p	Chr1:198828198-198828219[-]
LIG4	ENST00000356922	hsa-mir-181a-3p	Chr1:198828198-198828219[-]
LIG4	ENST00000310534	hsa-mir-181c-3p	Chr19:13985577-13985598[+]
LIG4	ENST00000356922	hsa-mir-181c-3p	Chr19:13985577-13985598[+]
LIG4	ENST00000310534	hsa-mir-19a-5p	Chr13:92003158-92003179[+]
LIG4	ENST00000310534	hsa-mir-19b-3p	Chr13:92003499-92003521[+]
LIG4	ENST00000356922	hsa-mir-19b-3p	Chr13:92003499-92003521[+]
LIG4	ENST00000310534	hsa-mir-19b-3p	ChrX:133303713-133303735[-]
LIG4	ENST00000356922	hsa-mir-19b-3p	ChrX:133303713-133303735[-]
LIG4	ENST00000310534	hsa-mir-26a-5p	Chr12:58218441-58218462[-]
LIG4	ENST00000310534	hsa-mir-26a-5p	Chr3:38010904-38010925[+]
LIG4	ENST00000310534	hsa-mir-369-5p	Chr14:101531943-101531964[+]
LIG4	ENST00000356922	hsa-mir-369-5p	Chr14:101531943-101531964[+]

Total:3 Current:1 [First] [Prev] Next Last