Search_Gene

Query Gene
Gene name: Example: BCL2L11, ERCC1

Symbol:

LIG4

Description:

ligase IV, DNA, ATP-dependent [Source:HGNC Symbol;Acc:6601]

Location:

Chr13:108859794-108870716[-]

CRmiRSNP:

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Records:null

Compound	CRmiRSNP	SNP_sig	Model	Molecule	Mol_sig	Type

Model : M1-Allele, M2-Recessive, M3-Additive, M4-Dominant
Total:0 Current:1 [First] [Prev] [Next] [Last]

Compound:

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Records:169

Gene	Compound	Gen_sig	Exp_pattern
LIG4	NSC 666453	0.001	Down
LIG4	NSC 669282	0.005	Up
LIG4	NSC 671002	0.004	Down
LIG4	Benzoic acid, 2,4-dichloro-, 6-acetyl-1,2,3,4-tetrahydro- 4-oxo-1,3-diphenyl-2-thioxothieno[2,3-d]pyrimidin-5-yl ester	0.018	Down
LIG4	NSC 671314	0.041	Down
LIG4	NSC 671689	0.001	Down
LIG4	NSC 672434	0.007	Up
LIG4	NSC 673095	0.039	Down
LIG4	9,10-Anthracenedione, 1-[(oxiranylmethyl)amino]-	0.027	Down
LIG4	NSC 673457	0.004	Down
LIG4	SN-38	0.003	Down
LIG4	2-Acetylimidazo[4,5-b]pyridin 4 piperidino 3 thiosemicarbazone	0.009	Down
LIG4	NSC 674182	0.013	Down
LIG4	NSC 674184	0.037	Down
LIG4	(Z)-3-iodo-1,2-diphenyl-2-propen-1-one	0.007	Up

Expression pattern: Sensitivity / Resistance
Total:12 Current:4 First Prev Next Last

SNP:

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Records:56

SNP	Gene	SNP_location	SNP_allele
rs113388531	LIG4	Chr13:108859800	G/A
rs113388531	LIG4	ChrLRG_79:108859800	G/A
rs10131	LIG4	Chr13:108859846	C/T
rs10131	LIG4	ChrLRG_79:108859846	C/T
rs75642465	LIG4	Chr13:108859898	C/T
rs75642465	LIG4	ChrLRG_79:108859898	C/T
rs146506306	LIG4	Chr13:108860025	-/AAAA
rs146506306	LIG4	ChrLRG_79:108860025	-/AAAA
rs116018061	LIG4	Chr13:108860055	T/A
rs116018061	LIG4	ChrLRG_79:108860055	T/A
rs201529988	LIG4	Chr13:108860145	G/C
rs201529988	LIG4	ChrLRG_79:108860145	G/C
rs79925936	LIG4	Chr13:108860180	G/A
rs79925936	LIG4	ChrLRG_79:108860180	G/A
rs78960349	LIG4	Chr13:108860181	C/A

Total:4 Current:1 [First] [Prev] Next Last

miRNA:

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Records:33

Gene	Gen_transcript	miRNA	miR_location
LIG4	ENST00000310534	hsa-mir-144-5p	Chr17:27188601-27188622[-]
LIG4	ENST00000310534	hsa-mir-155-5p	Chr21:26946295-26946317[+]
LIG4	ENST00000310534	hsa-mir-181a-3p	Chr1:198828198-198828219[-]
LIG4	ENST00000356922	hsa-mir-181a-3p	Chr1:198828198-198828219[-]
LIG4	ENST00000310534	hsa-mir-181c-3p	Chr19:13985577-13985598[+]
LIG4	ENST00000356922	hsa-mir-181c-3p	Chr19:13985577-13985598[+]
LIG4	ENST00000310534	hsa-mir-19a-5p	Chr13:92003158-92003179[+]
LIG4	ENST00000310534	hsa-mir-19b-3p	Chr13:92003499-92003521[+]
LIG4	ENST00000356922	hsa-mir-19b-3p	Chr13:92003499-92003521[+]
LIG4	ENST00000310534	hsa-mir-19b-3p	ChrX:133303713-133303735[-]
LIG4	ENST00000356922	hsa-mir-19b-3p	ChrX:133303713-133303735[-]
LIG4	ENST00000310534	hsa-mir-26a-5p	Chr12:58218441-58218462[-]
LIG4	ENST00000310534	hsa-mir-26a-5p	Chr3:38010904-38010925[+]
LIG4	ENST00000310534	hsa-mir-369-5p	Chr14:101531943-101531964[+]
LIG4	ENST00000356922	hsa-mir-369-5p	Chr14:101531943-101531964[+]

Total:3 Current:1 [First] [Prev] Next Last