Search_Gene

Query Gene
Gene name: Example: BCL2L11, ERCC1

Symbol:

VPS53

Description:

Location:

Chr17:411908-624957[-]

CRmiRSNP:

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Records:null

Compound	CRmiRSNP	SNP_sig	Model	Molecule	Mol_sig	Type

Model : M1-Allele, M2-Recessive, M3-Additive, M4-Dominant
Total:0 Current:1 [First] [Prev] [Next] [Last]

Compound:

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Records:98

Gene	Compound	Gen_sig	Exp_pattern
VPS53	Neocuproin	0.026	Up
VPS53	NSC 58903	0.03	Down
VPS53	L-Lysine, N-[(methylamino)carbonyl]-N'-(phenylmethoxy- carbonyl)-, phenylmethyl ester	0.035	Down
VPS53	Oxalic acid, mono(4,9-dihydro-4,9-dioxonaphtho[2,3-d] thiazol-2-yl)hydrazide, monoethyl ester	0.047	Down
VPS53	NSC 639211	0.043	Up
VPS53	NSC 658874	0.039	Down
VPS53	Nitrotolazoline	0.015	Down
VPS53	NSC 668333	0.044	Up
VPS53	NSC 668578	0.03	Down
VPS53	NSC 669678	0.02	Down
VPS53	NSC 670314	0.02	Up
VPS53	Benzoic acid, 2,4-dichloro-, 6-acetyl-1,2,3,4-tetrahydro- 4-oxo-1,3-diphenyl-2-thioxothieno[2,3-d]pyrimidin-5-yl ester	0.038	Down
VPS53	NSC 672880	0.035	Down
VPS53	2-Ethylaminoestradiol	0.022	Down
VPS53	NSC 673828	0.024	Down

Expression pattern: Sensitivity / Resistance
Total:7 Current:2 First Prev Next Last

SNP:

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Records:316

SNP	Gene	SNP_location	SNP_allele
rs199746241	VPS53	Chr17:412340	CCTCACT/-
rs143385701	VPS53	Chr17:412346	T/C
rs146738736	VPS53	Chr17:412356	T/G
rs201995354	VPS53	Chr17:412387	T/C
rs78709351	VPS53	Chr17:412433	C/T
rs184679864	VPS53	Chr17:412439	C/T
rs200319731	VPS53	Chr17:412459	A/G
rs75659590	VPS53	Chr17:412467	G/C
rs201109438	VPS53	Chr17:412475	G/C
rs78648226	VPS53	Chr17:412520	C/T
rs201164240	VPS53	Chr17:412540	-/G
rs186979454	VPS53	Chr17:412544	C/T
rs76976372	VPS53	Chr17:412553	G/T
rs77559559	VPS53	Chr17:412554	T/C
rs77622030	VPS53	Chr17:412562	G/A

Total:22 Current:1 [First] [Prev] Next Last

miRNA:

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Records:38

Gene	Gen_transcript	miRNA	miR_location
VPS53	ENST00000268978	hsa-mir-106b-5p	Chr7:99691666-99691686[-]
VPS53	ENST00000268978	hsa-mir-10a-5p	Chr17:46657266-46657288[-]
VPS53	ENST00000268978	hsa-mir-122-5p	Chr18:56118320-56118341[+]
VPS53	ENST00000268978	hsa-mir-191-3p	Chr3:49058064-49058085[-]
VPS53	ENST00000268978	hsa-mir-218-5p	Chr4:20529922-20529942[+]
VPS53	ENST00000268978	hsa-mir-218-5p	Chr5:168195216-168195236[-]
VPS53	ENST00000268978	hsa-mir-22-5p	Chr17:1617246-1617267[-]
VPS53	ENST00000321906	hsa-mir-30b-3p	Chr8:135812775-135812796[-]
VPS53	ENST00000389040	hsa-mir-30b-3p	Chr8:135812775-135812796[-]
VPS53	ENST00000321906	hsa-mir-30c-1-3p	Chr1:41223011-41223032[+]
VPS53	ENST00000389040	hsa-mir-30c-1-3p	Chr1:41223011-41223032[+]
VPS53	ENST00000321906	hsa-mir-337-5p	Chr14:101340852-101340872[+]
VPS53	ENST00000389040	hsa-mir-337-5p	Chr14:101340852-101340872[+]
VPS53	ENST00000268978	hsa-mir-346	Chr10:88024504-88024526[-]
VPS53	ENST00000321906	hsa-mir-367-5p	Chr4:113569071-113569092[-]

Total:3 Current:1 [First] [Prev] Next Last