Search_Gene

Query Gene
Gene name: Example: BCL2L11, ERCC1

Symbol:

COL5A1

Description:

collagen, type V, alpha 1 [Source:HGNC Symbol;Acc:2209]

Location:

Chr9:137533620-137736686[+]

CRmiRSNP:

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Records:null

Compound	CRmiRSNP	SNP_sig	Model	Molecule	Mol_sig	Type

Model : M1-Allele, M2-Recessive, M3-Additive, M4-Dominant
Total:0 Current:1 [First] [Prev] [Next] [Last]

Compound:

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Records:308

Gene	Compound	Gen_sig	Exp_pattern
COL5A1	1H,3H-Benzo[c]pyrrolo[3,4-a]carbazole-1,3-dione, 2,3a,3b,4,5,6,7,7a-octahydro-2-(4-methoxyphenyl)- 9-methyl-5-phenyl-	0.002	Down
COL5A1	NSC 689298	0.033	Down
COL5A1	NSC 689409	0.022	Down
COL5A1	NSC 690134	0.001	Down
COL5A1	NSC 691415	0.002	Down
COL5A1	NSC 691421	0.034	Down
COL5A1	NSC 692347	0.024	Down
COL5A1	NSC 693167	0.036	Down
COL5A1	NSC 693622	0.038	Up
COL5A1	NSC 694461	0.008	Down
COL5A1	NSC 69577	0.007	Up
COL5A1	1H-1,4,7-Triazonine-1-acetic acid, 4-[(dihydroxyphosphoryl)methyl]-octahydro-	0.047	Up
COL5A1	NSC 697042	0.045	Down
COL5A1	NSC 697646	0.02	Up
COL5A1	NSC 697655	0.028	Down

Expression pattern: Sensitivity / Resistance
Total:21 Current:14 First Prev Next Last

SNP:

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Records:63

SNP	Gene	SNP_location	SNP_allele
rs12553247	COL5A1	Chr9:137734163	C/T
rs56259444	COL5A1	Chr9:137734207	C/T
rs13946	COL5A1	Chr9:137734232	C/T
rs112503631	COL5A1	Chr9:137734290	C/T
rs181323324	COL5A1	Chr9:137734294	G/A
rs55951876	COL5A1	Chr9:137734310	G/C
rs146776422	COL5A1	Chr9:137734338	C/T
rs55748801	COL5A1	Chr9:137734339	G/A
rs12722	COL5A1	Chr9:137734416	C/T
rs35115861	COL5A1	Chr9:137734424	-/G
rs114171895	COL5A1	Chr9:137734432	G/A
rs1134114	COL5A1	Chr9:137734460	C/T
rs184272423	COL5A1	Chr9:137734628	G/A
rs142194317	COL5A1	Chr9:137734638	A/G
rs78312121	COL5A1	Chr9:137734691	G/A

Total:5 Current:1 [First] [Prev] Next Last

miRNA:

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Records:63

Gene	Gen_transcript	miRNA	miR_location
COL5A1	ENST00000355306	hsa-mir-124-5p	Chr20:61809866-61809887[+]
COL5A1	ENST00000355306	hsa-mir-124-5p	Chr8:65291730-65291751[+]
COL5A1	ENST00000355306	hsa-mir-124-5p	Chr8:9760948-9760969[-]
COL5A1	ENST00000371815	hsa-mir-125a-3p	Chr19:52196559-52196580[+]
COL5A1	ENST00000355306	hsa-mir-125a-5p	Chr19:52196521-52196544[+]
COL5A1	ENST00000355306	hsa-mir-125b-5p	Chr11:121970517-121970538[-]
COL5A1	ENST00000355306	hsa-mir-125b-5p	Chr21:17962573-17962594[+]
COL5A1	ENST00000371817	hsa-mir-128	Chr2:136423016-136423036[+]
COL5A1	ENST00000371817	hsa-mir-128	Chr3:35786019-35786039[+]
COL5A1	ENST00000371815	hsa-mir-135b-3p	Chr1:205417451-205417472[-]
COL5A1	ENST00000371815	hsa-mir-138-5p	Chr16:56892439-56892461[+]
COL5A1	ENST00000371815	hsa-mir-138-5p	Chr3:44155726-44155748[+]
COL5A1	ENST00000371815	hsa-mir-143-5p	Chr5:148808507-148808528[+]
COL5A1	ENST00000355306	hsa-mir-150-5p	Chr19:50004089-50004110[-]
COL5A1	ENST00000355306	hsa-mir-154-5p	Chr14:101526106-101526127[+]

Total:5 Current:1 [First] [Prev] Next Last